run.colony: A function to run Colony2 from within the R environment.
In jonesor/rcolony: Tools for implementation and visualisation of Colony2 and its outputs
Description
Usage
Arguments
Value
Author(s)
References
See Also
Description
This function used system2 to call Colony2 from within R.
Usage
1
run.colony(colonyexecpath = "prompt", datfilepath = "prompt", wait = TRUE)
Arguments
colonyexecpath
The path to the Colony2 executable. If none is given, and the function defaults to \"prompt\", then you will be prompted to click on the file.
datfilepath
The path to the DAT file that you wish to run. If none is given, and the function defaults to \"prompt\", then you will be prompted to click on the file.
wait
Should R wait for Colony2 to be run by the system or not? TRUE/FALSE
Value
return value (0 if success)
Author(s)
Timothee Flutre
Owen R. Jones
References
Wang, J. (2004) Sibship reconstruction from genetic data with typing errors. Genetics 166: 1963-1979.
See Also
jonesor/rcolony documentation built on May 8, 2019, 11:18 p.m.
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Description Usage Arguments Value Author(s) References See Also
Description
This function used system2 to call Colony2 from within R.
Usage
1 | run.colony(colonyexecpath = "prompt", datfilepath = "prompt", wait = TRUE)
|
Arguments
colonyexecpath |
The path to the Colony2 executable. If none is given, and the function defaults to \"prompt\", then you will be prompted to click on the file. |
datfilepath |
The path to the DAT file that you wish to run. If none is given, and the function defaults to \"prompt\", then you will be prompted to click on the file. |
wait |
Should R wait for Colony2 to be run by the system or not? TRUE/FALSE |
Value
return value (0 if success)
Author(s)
Timothee Flutre
Owen R. Jones
References
Wang, J. (2004) Sibship reconstruction from genetic data with typing errors. Genetics 166: 1963-1979.
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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