Description Usage Arguments Value See Also
Performs statistical test to determine the differentiation level between two sets of gene expression samples. Performs univariate (rowwise) Welch tests.
1 | differentiate(expressions, control_group, target_group)
|
expressions |
Gene expression matrix: row = gene, column = sample and element = expression level. |
control_group |
Column indexes (samples) that are part of the differentiation control group. |
target_group |
Column indexes (samples) that are part of the differentiation target group. |
List of gene differentiation levels, in the order of the lines of the input matrix.
See example of use in the site https://github.com/joseflaviojr/transmod
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