buildEnvironment: Build SwabSeq environment variable

Description Usage

View source: R/buildEnvironment.R

Description

This function creates an env() containing information about directory structures and key run parameters.

Usage

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buildEnvironment(
  basedir.dir,
  remote.dir,
  localmirror.dir,
  bcl.dir,
  threads = 8,
  lbuffer = 3e+07,
  fastqcr = F
)

joshsbloom/swabseqr documentation built on Feb. 11, 2022, 5:14 p.m.