Files in joshwlambert/relaxedDAISIE
Scripts and data for Lambert et al. (doi:

.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
R/calc_rr_approach_cr.R R/create_data.R R/relaxedDAISIE_data.R README.md
bash/install/install_relaxedDAISIE.sh
bash/run_model/submit_Aldabra_Group_models.sh
bash/run_model/submit_Azores_alt_m_models.sh
bash/run_model/submit_Azores_models.sh
bash/run_model/submit_Canaries_alt_m_models.sh
bash/run_model/submit_Canaries_models.sh
bash/run_model/submit_Cape_Verde_alt_m_models.sh
bash/run_model/submit_Cape_Verde_models.sh
bash/run_model/submit_Chatham_alt_m_models.sh
bash/run_model/submit_Chatham_models.sh
bash/run_model/submit_Comoros_models.sh
bash/run_model/submit_Galapagos_alt_m_models.sh
bash/run_model/submit_Galapagos_models.sh
bash/run_model/submit_Greater_Antilles_alt_m_models.sh
bash/run_model/submit_Greater_Antilles_models.sh
bash/run_model/submit_Guadalupe_alt_m_models.sh
bash/run_model/submit_Guadalupe_models.sh
bash/run_model/submit_Guam_Marianas_alt_m_models.sh
bash/run_model/submit_Guam_Marianas_models.sh
bash/run_model/submit_Hawaii_alt_m_models.sh
bash/run_model/submit_Hawaii_models.sh
bash/run_model/submit_Hispaniola_models.sh
bash/run_model/submit_Juan_Fernandez_models.sh
bash/run_model/submit_Lord_Howe_alt_m_models.sh
bash/run_model/submit_Lord_Howe_models.sh
bash/run_model/submit_Madeira_alt_m_models.sh
bash/run_model/submit_Madeira_models.sh
bash/run_model/submit_Marquesas_alt_m_models.sh
bash/run_model/submit_Marquesas_models.sh
bash/run_model/submit_Mauritius_Island_alt_m_models.sh
bash/run_model/submit_Mauritius_Island_models.sh
bash/run_model/submit_New_Caledonia_alt_m_models.sh
bash/run_model/submit_New_Caledonia_models.sh
bash/run_model/submit_New_Zealand_models.sh
bash/run_model/submit_Niue_models.sh
bash/run_model/submit_Norfolk_alt_m_models.sh
bash/run_model/submit_Norfolk_models.sh
bash/run_model/submit_Ogasawara_alt_m_models.sh
bash/run_model/submit_Ogasawara_models.sh
bash/run_model/submit_Palau_alt_m_models.sh
bash/run_model/submit_Palau_models.sh
bash/run_model/submit_Reunion_alt_m_models.sh
bash/run_model/submit_Reunion_models.sh
bash/run_model/submit_Samoa_alt_m_models.sh
bash/run_model/submit_Samoa_models.sh
bash/run_model/submit_SaoTome_Principe_alt_m_models.sh
bash/run_model/submit_SaoTome_Principe_models.sh
bash/run_model/submit_Seychelles_Inner_models.sh
bash/run_model/submit_Socorro_alt_m_models.sh
bash/run_model/submit_Socorro_models.sh
data/Aldabra_Group.RData
data/Azores.RData
data/Azores_alt_m.RData
data/Canaries.RData
data/Canaries_alt_m.RData
data/Cape_Verde.RData
data/Cape_Verde_alt_m.RData
data/Chatham.RData
data/Chatham_alt_m.RData
data/Comoros.RData
data/Galapagos.RData
data/Galapagos_alt_m.RData
data/Greater_Antilles.RData
data/Greater_Antilles_alt_m.RData
data/Guadalupe.RData
data/Guadalupe_alt_m.RData
data/Guam_Marianas.RData
data/Guam_Marianas_alt_m.RData
data/Hawaii.RData
data/Hawaii_alt_m.RData
data/Hispaniola.RData
data/Juan_Fernandez.RData
data/Juan_Fernandez_alt_m.RData
data/Lord_Howe.RData
data/Lord_Howe_alt_m.RData
data/Madeira.RData
data/Madeira_alt_m.RData
data/Marquesas.RData
data/Marquesas_alt_m.RData
data/Mauritius_Island.RData
data/Mauritius_Island_alt_m.RData
data/New_Caledonia.RData
data/New_Caledonia_alt_m.RData
data/New_Zealand.RData
data/Niue.RData
data/Niue_alt_m.RData
data/Norfolk.RData
data/Norfolk_alt_m.RData
data/Ogasawara.RData
data/Ogasawara_alt_m.RData
data/Palau.RData
data/Palau_alt_m.RData
data/Reunion.RData
data/Reunion_alt_m.RData
data/Samoa.RData
data/Samoa_alt_m.RData
data/SaoTome_Principe.RData
data/SaoTome_Principe_alt_m.RData
data/Seychelles_Inner.RData
data/Socorro.RData
data/Socorro_alt_m.RData
man/Aldabra_Group.Rd man/Azores.Rd man/Azores_alt_m.Rd man/Canaries.Rd man/Canaries_alt_m.Rd man/Cape_Verde.Rd man/Cape_Verde_alt_m.Rd man/Chatham.Rd man/Chatham_alt_m.Rd man/Comoros.Rd man/Galapagos.Rd man/Galapagos_alt_m.Rd man/Greater_Antilles.Rd man/Greater_Antilles_alt_m.Rd man/Guadalupe.Rd man/Guadalupe_alt_m.Rd man/Guam_Marianas.Rd man/Guam_Marianas_alt_m.Rd man/Hawaii.Rd man/Hawaii_alt_m.Rd man/Hispaniola.Rd man/Juan_Fernandez.Rd man/Juan_Fernandez_alt_m.Rd man/Lord_Howe.Rd man/Lord_Howe_alt_m.Rd man/Madeira.Rd man/Madeira_alt_m.Rd man/Marquesas.Rd man/Marquesas_alt_m.Rd man/Mauritius_Island.Rd man/Mauritius_Island_alt_m.Rd man/New_Caledonia.Rd man/New_Caledonia_alt_m.Rd man/New_Zealand.Rd man/Niue.Rd man/Niue_alt_m.Rd man/Norfolk.Rd man/Norfolk_alt_m.Rd man/Ogasawara.Rd man/Ogasawara_alt_m.Rd man/Palau.Rd man/Palau_alt_m.Rd man/Reunion.Rd man/Reunion_alt_m.Rd man/Samoa.Rd man/Samoa_alt_m.Rd man/SaoTome_Principe.Rd man/SaoTome_Principe_alt_m.Rd man/Seychelles_Inner.Rd man/Socorro.Rd man/Socorro_alt_m.Rd man/calc_rr_approach_cr.Rd man/create_data.Rd
pics/map.png
relaxedDAISIE.Rproj
scripts/plots/gamma_dist.R scripts/plots/k_gamma_dist.R scripts/plots/map.R scripts/sup_mat/clade_likelihood.R scripts/sup_mat/rr_approach_cr.R tests/testthat.R tests/testthat/test-calc_rr_approach_cr.R
vignettes/.gitignore
vignettes/Reproducibility.Rmd
joshwlambert/relaxedDAISIE documentation built on Nov. 27, 2021, 6:06 p.m.