Files in jpuntomarcos/CNVfilteR
Identifies false positives of CNV calling tools by using SNV calls
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/filterCNVs.R
R/getVariantScore.R
R/loadCNVcalls.R
R/loadSNPsFromVCF.R
R/loadVCFs.R
R/plotAllCNVs.R
R/plotScoringModel.R
R/plotVariantsForCNV.R
R/utils.R
README.md
inst/CITATION
inst/extdata/DECoN.CNVcalls.2.csv
inst/extdata/DECoN.CNVcalls.csv
inst/extdata/variants.sample1.vcf.gz
inst/extdata/variants.sample1.vcf.gz.tbi
inst/extdata/variants.sample2.vcf.gz
inst/extdata/variants.sample3.vcf
man/auxAddCNcolumn.Rd
man/auxGetVcfSource.Rd
man/auxProcessVariants.Rd
man/filterCNVs.Rd
man/getVariantScore.Rd
man/loadCNVcalls.Rd
man/loadSNPsFromVCF.Rd
man/loadVCFs.Rd
man/plotAllCNVs.Rd
man/plotScoringModel.Rd
man/plotVariantsForCNV.Rd
vignettes/CNVfilteR.Rmd
