joinPromoterDB: Join promoterDB objects.
In jsalojar/TFbindR: Identification and Counting of the Occurence of Motifs in a Set of Promoter Sequences. Motif Enrichment Analysis
Description
Usage
Arguments
Value
View source: R/joinPromoterDB.R
Description
Combing together promoter.DB objects into one promoter.DB.
Usage
1
joinPromoterDB(DB1, DB2, out.DB)
Arguments
DB1
prmoterDB object
DB2
promoterDB object
out.DB
the output file for the combined promoterDB object.
Value
A promoterDB object - list with 3 elements, plus - a count matrix of the occurence of motifs in the "plus" strand, minus - a count matrix of the occurence of motifs in the "minus" strand and both - a count matrix of the occurence of motifs in the "minus" and "plus" strands together.
jsalojar/TFbindR documentation built on Dec. 9, 2019, 12:16 a.m.
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Description Usage Arguments Value
View source: R/joinPromoterDB.R
Description
Combing together promoter.DB objects into one promoter.DB.
Usage
1 | joinPromoterDB(DB1, DB2, out.DB)
|
Arguments
DB1 |
prmoterDB object |
DB2 |
promoterDB object |
out.DB |
the output file for the combined promoterDB object. |
Value
A promoterDB object - list with 3 elements, plus - a count matrix of the occurence of motifs in the "plus" strand, minus - a count matrix of the occurence of motifs in the "minus" strand and both - a count matrix of the occurence of motifs in the "minus" and "plus" strands together.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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