excel_to_plan: Create a drake plan using tabular species data

In jscamac/edmaps: Estimate Likelihood of Pest Establishment

Create a drake plan using tabular species data

Description

Import parameters from an Excel xlsx file and create a drake plan to estimate establishment likelihoods.

Usage

excel_to_plan(file)

Arguments

file	Character. File path to an xlsx file containing required parameters for creating a species plan. See Details and species_plan() for further information.

Details

To simplify reproducibility, edmaps provides an Excel interface for specifying species parameters relevant to estimating establishment likelihood. An example spreadsheet is bundled with the package, available at the path given by system.file('extdata/parameters.xlsx', package='edmaps'). The spreadsheet has two sheets, the first specifying "global" parameters that will apply to all species (e.g. file paths to rasters that will), be used regardless of species identity and the second specifying parameters that can vary by species. In the second sheet, each row corresponds to a separate species. Tooltips and data validation guide the user with respect to expected/allowable data.

Value

A drake plan with a combined workflow for all species.

jscamac/edmaps documentation built on June 11, 2022, 1:26 a.m.