Man pages for jschmiedel/tempura
Fit free energies of folding and binding from doubledeepPCA data
| dg_basic_analyses | Produces some basic analyses plots |
| dg_bootstrap | Bootstrap procedure to estimate the uncertainty of free... |
| dg_collect_models | Reads and collects individual dg models from tmp folder |
| dg_estimate | Estimate free energies (dG) for a model from a dataset |
| dg__fitness_from_model | Predict fitness from computed dG model |
| dg__model_fn | the dg model function to be minimized |
| dg__model_gr | gradient for the dg model function to be minimized |
| dg__model_optim | calls the optimzation routine to estimate dG models |
| dg_prepare_datasets | Prepare DiMSum-processed doubledeepPCA datasets for free... |
| dg_prepare_model | Prepare parameters for a specific dG model |
| dg_run_parallel | A wrapper for parallel exectuion of dg_estimate() or... |
