gather_group_for_species: gather_group_for_species function

In jsgosnell/ratlantis: R package for developing, executing, and assessing Atlantis ecosystem models

Description

This function aids in determining the functional group and higher order classification information for species to be included in the Atlantis model

Usage

gather_group_for_species(species_list_location = getwd(), species_list_csv)

Arguments

species_list_location	where species list is located; defaults to working directory
species_list_csv	name of csv file with the following column headers: Genus, species,common_name

Details

This function aids in gathering higher taxonomic information and Atlantis group types for species to be included in an Atlantis model. User submits a list of potential species to be included in the model. The code gathers data on species from cloud-based, public data sources.

jsgosnell/ratlantis documentation built on May 20, 2019, 2:08 a.m.