parse_ssearch_out: Parses the console output of ssearch
In jspaezp/jspputils: Series of utilities to interface R with proteomics data analysis
Description
Usage
Arguments
Value
Examples
Description
It is designed to parse que tabular out of ssearch (flag -m 8C)
Usage
1
parse_ssearch_out(ssearch_out)
Arguments
ssearch_out
tabular console output of ssearch as a character vector (element per line)
Value
data.frame with output of the ssearch search
Examples
1
2
3
ss_out <- find_in_fasta(c('PEPTIDE'), 'arabidopsis.fasta', '~/usr/bin/ssearch36')
parse_ssearch_out(ss_out)
jspaezp/jspputils documentation built on May 23, 2019, 2:50 p.m.
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Description Usage Arguments Value Examples
Description
It is designed to parse que tabular out of ssearch (flag -m 8C)
Usage
1 | parse_ssearch_out(ssearch_out)
|
Arguments
ssearch_out |
tabular console output of ssearch as a character vector (element per line) |
Value
data.frame with output of the ssearch search
Examples
1 2 3 | ss_out <- find_in_fasta(c('PEPTIDE'), 'arabidopsis.fasta', '~/usr/bin/ssearch36')
parse_ssearch_out(ss_out)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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