Files in julian-gehring/SomaticSignatures
Somatic Signatures
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/classes.R
R/cluster.R
R/correlate.R
R/decomposition.R
R/gc.R
R/granges-utils.R
R/hs-chrs.R
R/kmers.R
R/motif-matrix.R
R/mutation-context.R
R/mutational-plots.R
R/mutational-signatures.R
R/mutect.R
R/normalize.R
R/number-signatures.R
R/rainfall.R
R/signature-plots.R
R/utils.R
README.md
data/kmers.rda
data/sca_mm.rda
data/sca_motifs_tiny.rda
data/sca_sigs.rda
data/signatures21.rda
inst/CITATION
inst/css/bioc.css
inst/examples/mutect.tsv
inst/scripts/kmers-data.R
inst/signatures/signatures.txt
man/MutationalSignatures-class.rd
man/SomaticSignatures-package.Rd
man/cluster-spetrum.Rd
man/decomposition-functions.Rd
man/gc.Rd
man/granges-utils.Rd
man/hs-chrs.Rd
man/kmers-data.Rd
man/kmers.Rd
man/motif-functions.Rd
man/mutation-context.Rd
man/mutation-distribution.Rd
man/mutational-normalization.Rd
man/mutational-plots.Rd
man/mutational-signatures.Rd
man/mutect.Rd
man/number-signatures.Rd
man/sca-data.Rd
man/signature-plot-functions.Rd
man/signatures21-data.Rd
man/utils.Rd
tests/testthat.R
tests/testthat/test-SomaticSignatures.R
vignettes/SomaticSignatures-vignette.Rhtml
vignettes/SomaticSignatures-vignette.org
vignettes/bioc.css
vignettes/references.bib
vignettes/references.html
