Files in justinkamerman/QFASA
Quantitative Fatty Acid Signature Analysis
.Rbuildignore
.gitignore
.travis.yml
CRAN-RELEASE
CRAN-SUBMISSION
DESCRIPTION
LICENSE
Makefile
NAMESPACE
NEWS.md
QFASA.Rproj
R/All_CI_Code.R
R/All_MUFASA_Code.R
R/All_Rep_Code.R
R/All_Selection_Algorithm_Code.R
R/All_Simplified_MUFASA_Code.R
R/All_SimultaneousEst_MUFASA_Code.R
R/CC.R
R/Confidence_Interval_Beta_Distribution.R
R/FAset.R
R/Prey_Cluster.R
R/Simultaneous_Estimation_of_CCs.R
R/bal.diet.data.R
R/predatorFAs.R
R/prey.on.prey.R
R/preyFAs.R
R/pseudo.pred.R
R/qfasa.R
R/roxygentags.r
R/unbal.diet.data.R
README.Rmd
cran-comments.md
data/CC.rda
data/FAset.rda
data/bal.diet.data.RData
data/predatorFAs.rda
data/preyFAs.rda
data/unbal.diet.data.RData
dev/Example.ipynb
dev/Original.ipynb
dev/Prototype.R
dev/Prototype.ipynb
dev/shiny/global.R
dev/shiny/server.R
dev/shiny/ui.R
inst/exdata/AdditionalMeasuresAIT.csv
inst/exdata/AdditionalMeasuresCS.csv
inst/exdata/AdditionalMeasuresKL.csv
inst/exdata/DietEstAIT.csv
inst/exdata/DietEstCS.csv
inst/exdata/DietEstKL.csv
man/AIT.dist.Rd
man/AIT.more.Rd
man/AIT.obj.Rd
man/CC.Rd
man/CS.more.Rd
man/CS.obj.Rd
man/FAset.Rd
man/KL.dist.Rd
man/KL.more.Rd
man/KL.obj.Rd
man/MEANmeth.Rd
man/POOLVARmeth.Rd
man/QFASA.Rd
man/QFASA.const.eqn.Rd
man/Tstar.beta.Rd
man/backward.elimination.Rd
man/bal.diet.data.Rd
man/bal.rep.CI.Rd
man/bestBackwardModel.Rd
man/bestForwardModel.Rd
man/bestSubset.Rd
man/beta.meths.CI.Rd
man/beta.pval.k.Rd
man/bias.all.Rd
man/bias.comp.Rd
man/bisect.beta.lim.Rd
man/chisq.CA.Rd
man/chisq.dist.Rd
man/comp.Tstar.beta.Rd
man/comp.beta.pval.k.Rd
man/comp.gen.pseudo.seals.Rd
man/comp.p.beta.Rd
man/comp.rep.Rd
man/conf.meth.Rd
man/create.d.mat.Rd
man/cs_distance.mat.Rd
man/data.sim.beta.Rd
man/dummy.Rd
man/evaluateCombination.Rd
man/evaluateModel.Rd
man/forward.selection.Rd
man/gen.pseudo.seals.Rd
man/likelihoodEstimates.Rd
man/mean_geometric.Rd
man/mod.zeros.FA.sig.Rd
man/mod.zeros.FA.sig.mat.Rd
man/multiplicativeReplacement.Rd
man/opt.beta.lim.Rd
man/p.MLE.Rd
man/p.MUFASA.Rd
man/p.QFASA.Rd
man/p.SMUFASA.Rd
man/p.beta.Rd
man/p.sim.QFASA.Rd
man/predatorFAs.Rd
man/prey.cluster.Rd
man/prey.on.prey.Rd
man/preyFAs.Rd
man/pseudo.pred.Rd
man/pseudo.pred.norm.Rd
man/pseudo.pred.rep.Rd
man/pseudo.pred.table.Rd
man/pseudo.seal.Rd
man/rho.boot.fun.Rd
man/rho.jack.fun.Rd
man/root.beta.Rd
man/split_prey.Rd
man/testfordiff.ind.boot.Rd
man/testfordiff.ind.boot.fun.Rd
man/testfordiff.ind.pval.Rd
man/two.factor.rep.Rd
man/unbal.diet.data.Rd
man/unbal.rep.CI.Rd
man/unbal.rho.boot.fun.Rd
man/unbal.rho.jack.fun.Rd
man/unbal.two.factor.rep.Rd
man/uniroot.beta.Rd
man/zeroEstimates.Rd
src/.gitignore
src/CommonDiet.cpp
src/ErrorModelSimpleEquant.cpp
src/Makefile
src/Makefile.win
src/code.cpp
tests/testthat.R
tests/testthat/testAIT.R
tests/testthat/testGeometricMean.R
tests/testthat/testMatrixDimensions.R
tests/testthat/testModelWorkflowAIT.R
tests/testthat/testModelWorkflowCS.R
tests/testthat/testModelWorkflowKL.R
vignettes/MUFASA_Workflow_Example.Rmd
vignettes/Parallel_Execution_for_Confidence_Intervals.Rmd
vignettes/QFASA_Workflow_Example.Rmd
vignettes/SMUFASA_Workflow_Example.Rmd
