RelAmounts: This function takes in a data frame and optional parameters...
In juyeki/MetabR: Functions to assist in the current UCLA Metabolomics Quality Control and Analysis Pipeline.
Description
Usage
Arguments
Author(s)
Description
This function transforms the data into a form that can be used for plotting and visualization of the relative amounts of the different metabolites in the analysis.
Usage
1
RelAmounts(DF = data2, anova = TRUE, type = '250K')
Arguments
DF
This parameter is a dataframe (data2) that contains information about the sample. The dataframe should contain the following columns: Name, Iso, Condition, Exp, Value, Used_ID, KEGG.ID, Nr.C, Rt, and Formula columns.
anova
Optional parameter (default is FAlSE). Set to true if ANOVA is to be calculated (for actual analysis).
type
Optional parameter. Set to '250K' if running 250K QC script.
output
Optional parameter (default is FALSE). Set to TRUE if the Amounts.csv is to be outputted.
Author(s)
Gerardo Javier, Daniel Tan, Jordan Uyeki
juyeki/MetabR documentation built on Aug. 6, 2020, 3:32 a.m.
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Description Usage Arguments Author(s)
Description
This function transforms the data into a form that can be used for plotting and visualization of the relative amounts of the different metabolites in the analysis.
Usage
1 | RelAmounts(DF = data2, anova = TRUE, type = '250K')
|
Arguments
DF |
This parameter is a dataframe (data2) that contains information about the sample. The dataframe should contain the following columns: Name, Iso, Condition, Exp, Value, Used_ID, KEGG.ID, Nr.C, Rt, and Formula columns. |
anova |
Optional parameter (default is FAlSE). Set to true if ANOVA is to be calculated (for actual analysis). |
type |
Optional parameter. Set to '250K' if running 250K QC script. |
output |
Optional parameter (default is FALSE). Set to TRUE if the Amounts.csv is to be outputted. |
Author(s)
Gerardo Javier, Daniel Tan, Jordan Uyeki
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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