parseHGVS: HGVS Parser

In jweile/hgvsParseR: Parse HGVS variant descriptor strings

Description

Parses HGVS strings

Usage

parseHGVS(strings, aacode = c(NA, 1, 3))

Arguments

strings	A character vector containing the HGVS strings
aacode	allowed values: 1, 3, or NA. Determines whether 1-letter codes or 3-letter codes should be forced. NA uses input format.

Value

A data.frame with the following columns:

Examples

result <- parseHGVS(c("g.1318G>T","c.123_125inv","p.R123_L152del"))

jweile/hgvsParseR documentation built on Sept. 14, 2021, 10:45 p.m.