Description Usage Details Value
Internal constructor that creates an immutable new Target object. This function is not exported
and should not be called outside of the rapimave package itself. Target objects are generated
by the getTarget() method of a scoreset object (which itself
is generated using the getAllScoreSets()
and getScoreSet()
methods of a rapimave
object). However, this section explains the
functions that are available for these objects.
1 |
A ScoreSet object offers the following getter functions:
getName() returns the name of the target
getSequence() returns wildtype sequence of the target
getSequenceType() returns whether the sequence is at DNA or Protein level
getXrefUniprot() returns a Xref object for Uniprot
getXrefEnsembl() returns a Xref object for Ensembl
getXrefRefseq() returns a Xref object for Refseq
getReferenceMaps() returns a list of reference map objects that describe how this target maps to different reference genomes.
getScoreset() retunrs the URN of the scoreset to which this target belongs.
a new R-API MaveDB Target object.
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