cor_plot: Correlation plot for interested genes

In jyeh0909/TNBCBiomarker: A package using for gene analyses

Description

Using mixed methods to visualize a correlation matrix for each data set and the interested genes.

Usage

cor_plot(dataset, gene_info, gene, receptor, number.cex, title, tl.cex,
  cl.cex)

Arguments

dataset	A data set. The data set used.
gene_info	A character or a number. The gene information. Can be either gene name or gene ID. Gene name can be uppercase or lowercase. For example: The gene name can be "S100A8" or "s100a8".
gene	A character. The gene's name
number.cex	A number. The font size of correlation plot. If not specify, then the default is 1.
title	A character. The title of the correlation plot.
tl.cex	A number. The font size of diagonal text label. If not specify, then the default is 1.
cl.cex	A number. Cex of number-label in colorlabel. If not specify, then the default is 1.

Details

We will visulize the correaltion between interested genes by using corrplot.mixed function.

See Also

oneboxplot

corrplot.mixed

Examples

## Not run: 
cor_plot(chin,c(5294,5290,5133),c("PIK3CG", "PIK3CA", "PDCD1"),receptor = FALSE, number.cex = 2, title="CHIN", tl.cex = 2)

## End(Not run)

jyeh0909/TNBCBiomarker documentation built on June 8, 2019, 2:33 p.m.