find_complexes: Locate submatrices (protein complexes) on the diagonal of a...
In k-niss/bowtie: Create wTO matrices to decode network topology

Locate high-scoring square submatrices along the diagonal of a first-order direct interaction matrix.

find_complexes(
  full_matrix,
  min_conf_score = 0.75,
  max_complex_size = 500,
  give_up_expand = 50
)

`full_matrix`	A first-order direct interaction matrix containing scores between 0-1, where 1 indicates an interaction with highest confidence and 0 indicates no interaction.
`min_conf_score`	The minimum average score of a submatrix to be accepted as a protein complex (default: 0.75).
`max_complex_size`	The maximum size of a submatrix (default: 500).
`give_up_expand`	Give up expanding a submatrix for a given seed when exceeding N proteins in each direction (default: 50). This parameter was implemented to reduce computing time.