merge_complexes: Merge overlapping submatrices (protein complexes) produced by...

In k-niss/bowtie: Create wTO matrices to decode network topology

Description

Merge submatrices given by find.complexes if they overlap and apply a minimum size threshold.

Usage

merge_complexes(
  prot_complex_ranges,
  merge_if_overlap = 1,
  min_complex_size = 8
)

Arguments

prot_complex_ranges	A list of start and end ranges that indicate areas of protein complexes.
merge_if_overlap	Complexes are merged if they have this number of overlapping proteins (default: 1). A value of 1 will produce no overlapping protein complexes.
min_complex_size	The minimum size of a protein complex (default: 8).

Value

Returns a list of vectors that specifiy the start and end range of each submatrix

k-niss/bowtie documentation built on March 10, 2020, 10:10 a.m.