k22liang/calm: Covariate Assisted Large-scale Multiple testing

Statistical methods for multiple testing with covariate information. Traditional multiple testing methods only consider a list of test statistics, such as p-values. Our methods incorporate the auxiliary information, such as the lengths of gene coding regions or the minor allele frequencies of SNPs, to improve power.

Getting started

Package details

Bioconductor views Bayesian DifferentialExpression GeneExpression Genetics ImmunoOncology Metabolomics Microarray MultipleComparison Proteomics RNASeq Regression Sequencing Transcriptomics
LicenseGPL (>=2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
k22liang/calm documentation built on Nov. 4, 2019, 3:29 p.m.