synoptic: Create synoptic objects.

Description Usage Arguments Details Value Author(s) See Also Examples

Description

Create an object of class synoptic from a VegsoupPartitionFidelity object.

Usage

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synoptic(obj, stat.min = 0.4, p.max = 0.05, coverscale = TRUE)

Arguments

obj

VegsoupFidelity object.

stat.min

numeric. Threshold value of fidelity statistics.

p.max

numeric. Threshold value of fisher test.

coverscale

logical. Report quantiles in original abundance scale.

Details

The function processes an object of class VegsoupPartitionFidelity and returns an object of class synoptic containing all necessary information for the generation of synoptic vegetation tables.

Value

An object of class synoptic.

Author(s)

Roland Kaiser

See Also

monoptic

Examples

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library(vegsoup)
xx <- fidelity(VegsoupPartition(coenoflex(), k = 3))
x <- synoptic(xx)

x

# generate LaTex file
latex2(x, file = tempfile())

kardinal-eros/synoptic documentation built on Feb. 28, 2021, 2:32 a.m.