synoptic: Create synoptic objects.

In kardinal-eros/synoptic: Synoptic Tables for Vegsoup Objects

Create synoptic objects.

Description

Create an object of class synoptic from a VegsoupPartitionFidelity object.

Usage

synoptic(obj, stat.min = 0.4, p.max = 0.05, coverscale = TRUE)

Arguments

obj	VegsoupFidelity object.
stat.min	numeric. Threshold value of fidelity statistics.
p.max	numeric. Threshold value of fisher test.
coverscale	logical. Report quantiles in original abundance scale.

Details

The function processes an object of class ⁠VegsoupPartitionFidelity⁠ and returns an object of class ⁠synoptic⁠ containing all necessary information for the generation of synoptic vegetation tables.

Value

An object of class ⁠synoptic⁠.

Author(s)

Roland Kaiser

See Also

monoptic

Examples

library(vegsoup)
xx <- fidelity(VegsoupPartition(coenoflex(), k = 3))
x <- synoptic(xx)

x

# generate LaTex file
latex2(x, file = tempfile())

kardinal-eros/synoptic documentation built on Jan. 13, 2024, 9:16 p.m.