API for karltayeb/gseasusie
Gene Set Enrichment Analysis with Multiple Regression
| Global functions | |
|---|---|
| %>% | Man page |
| .onLoad | Source code |
| X2geneSet | Man page |
| color_sign | Source code |
| compute_elbo_tccm_ebnm | Source code |
| compute_fet_pval | Source code |
| compute_hypergeometric_pval | Source code |
| compute_responsibilities | Source code |
| concat_genesets | Man page |
| construct_geneset_matrix | Man page Source code |
| convertGeneSet | Man page |
| convert_alias_to_entrez | Man page |
| do_linear_susie | Source code |
| do_logistic_susie | Source code |
| do_logistic_susie_veb_boost | Source code |
| do_ora | Source code |
| do_tccm_point_normal_susie | Source code |
| enrichment_volcano | Man page |
| enrichment_volcano2 | Source code |
| fit_gsea_susie_webgestalt | Man page |
| fit_ora | Source code |
| fit_tccm_ebnm | Source code |
| fit_tccm_point_normal | Man page Source code |
| fit_tccm_point_normal_susie | Man page Source code |
| g | Source code |
| geneSet2X | Man page Source code |
| generate_f_normal | Source code |
| generate_f_pointmass | Man page Source code |
| generate_h_constant | Source code |
| generate_h_susie | Man page Source code |
| get_credible_set_summary | Man page Source code |
| get_cs_summary_condensed | Source code |
| get_gene_info | Source code |
| get_gene_set_summary | Man page Source code |
| get_go_info | Source code |
| get_plot_tbl | Source code |
| get_table_tbl | Source code |
| import_gsea_fun | Source code |
| initialize_tccm_ebnm | Source code |
| interactive_table | Source code |
| interactive_table2 | Source code |
| iterate_tccm_ebnm | Source code |
| label_sig_enrichments | Man page Source code |
| load.webGestalt.geneSet | Man page |
| load_all_go | Man page |
| load_all_msigdb | Man page |
| load_gene_sets | Man page |
| load_msigdb_geneset_x | Man page |
| load_pathways_genesets | Man page |
| load_webgestalt_geneset_x | Man page |
| logistic_susie_sparse | Source code |
| logsumexp | Source code |
| make_cs_tbl | Man page Source code Source code |
| make_cs_tbl_single | Source code |
| make_gt_table | Source code |
| make_reactable | Man page Source code |
| make_rwg_column_style | Man page Source code |
| make_sensible_colDef | Man page Source code |
| pack_group | Source code |
| prep_binary_data | Man page Source code |
| prep_sumstat_data | Source code |
| prepare_data_webgestalt | Man page |
| residual_enrichment_histogram | Source code |
| residual_enrichment_histogram2 | Source code |
| select_db | Source code |
| split_tibble | Source code |
| static_table | Man page Source code |
| static_table2 | Source code |
| with_tooltip | Source code |
