fit_gsea_susie_webgestalt: Fit logistic SuSiE using gene sets available from WebGestaltR
In karltayeb/gseasusie: Gene Set Enrichment Analysis with Multiple Regression
fit_gsea_susie_webgestalt R Documentation
Fit logistic SuSiE using gene sets available from WebGestaltR
Description
Fit logistic SuSiE using gene sets available from WebGestaltR
Usage
fit_gsea_susie_webgestalt(
list,
background,
enrichDatabase = "geneontology_Biological_Process",
organism = "hsapiens",
...
)
Arguments
list
a list of interesting genes
background
a list of background genes
enrichDatabase
a database of genesets available in WebGestaltR, see WebGestaltR::listGeneSet()
Value
a list with three items $fit $data and $time.
karltayeb/gseasusie documentation built on March 29, 2025, 2:17 p.m.
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| fit_gsea_susie_webgestalt | R Documentation |
Fit logistic SuSiE using gene sets available from WebGestaltR
Description
Fit logistic SuSiE using gene sets available from WebGestaltR
Usage
fit_gsea_susie_webgestalt(
list,
background,
enrichDatabase = "geneontology_Biological_Process",
organism = "hsapiens",
...
)
Arguments
list |
a list of interesting genes |
background |
a list of background genes |
enrichDatabase |
a database of genesets available in |
Value
a list with three items $fit $data and $time.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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