Description Usage Arguments Value
This function estimates the migration parameter between a local and meta community. This method is an extension from the paper "Taxa-Abundance Distributions in Microbial Communities Using Environmental Sequence Data" by Sloan et al.
1 |
local |
A local community of OTU reads for n samples. Rows should be OTUs, Columns should be Samples. A column of taxon indexes should be included at the beginning. Note that if this is not included, the first sample in your data will not be used. |
meta |
A meta community of OTU reads for n samples. Rows should be OTUs, Columns should be Samples. A column of taxon indexes should be included at the beginning. Note that if this is not included, the first sample in your data will not be used. |
a list of 2 elements. Element 1 is the estimate for the migration parameter. Element 2 is the mean bray curtis dissimilarity in the meta community sample.
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