indentifyAddedRemovedRegions: Identify regions that are specific to one of the two...
In kauralasoo/txrevise: Extend and revise transcript annotatons.
View source: R/compareGRanges.R
indentifyAddedRemovedRegions R Documentation
Identify regions that are specific to one of the two transcripts.
Description
Return NULL if there is no shared region between two transcripts.
Usage
indentifyAddedRemovedRegions(tx1_id, tx2_id, exons_list)
Arguments
tx1_id
id of transcript 1.
tx2_id
id of transcript 2.
exons_list
named list of GRanges objects containing the exon coordinates for each transcript.
Value
List of GRanges object. First contains exons specific to transcript 1, second contains exons
specifc to transcript 2, third contains the shared exons between the two transcripts.
Author(s)
Kaur Alasoo
kauralasoo/txrevise documentation built on March 31, 2022, 12:03 p.m.
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View source: R/compareGRanges.R
| indentifyAddedRemovedRegions | R Documentation |
Identify regions that are specific to one of the two transcripts.
Description
Return NULL if there is no shared region between two transcripts.
Usage
indentifyAddedRemovedRegions(tx1_id, tx2_id, exons_list)
Arguments
tx1_id |
id of transcript 1. |
tx2_id |
id of transcript 2. |
exons_list |
named list of GRanges objects containing the exon coordinates for each transcript. |
Value
List of GRanges object. First contains exons specific to transcript 1, second contains exons specifc to transcript 2, third contains the shared exons between the two transcripts.
Author(s)
Kaur Alasoo
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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