plot_overview_boxplot: Creates overview box plots.

In kazeera/hourglass: This Package Provides Visualizations of Annotated Numeric Data

Creates overview box plots.

Description

Creates overview box plots.

Usage

plot_overview_boxplot(
  df3,
  out_dir = ".",
  labels = "",
  log10_y = F,
  lvl.colors = NA,
  gradient_palette = "Spectral",
  legend.title = "Group",
  xlab = "variable",
  dot_color = "black",
  ylab = "value",
  font_size = 15,
  line_size = 1.3,
  save.to.file = T
)

Arguments

df3	A data frame in long format with 3 columns: order must be: 1) variable to group by (groups of boxes) = factor/character, 2) levels within each group (boxes) = factor/character, 3) values = numeric
out_dir	The output directory where the plot will be saved, default is current working directory.
labels	A character vector of at least length 1 that will be collapsed for file name/plot titles.
log10_y	Logical (TRUE/FALSE) indicating whether to log10-transform y-axis.
lvl.colors	A vector of colors to manually specify levels colors = box colors.
gradient_palette	RColorBrewer palette for variable colors if lvl.colors is NA. See RColorBrewer::display.brewer.all() for all options.
legend.title	Title for legend.
xlab	X axis label.
dot_color	A string indicating what color to make points, if NA, points will not be shown.
ylab	Y axis label.
font_size	The size of axis.title, axis.text, plot.title, legend.text and legend.title. The size of plot.subtitle is font_size / 2.
line_size	The thickness of axis lines.
save.to.file	If TRUE, save plot to file in out_dir. If FALSE, print to panel.

Value

Plot object if save.to.file is FALSE.

See Also

Other plotting: plot_corrplot(), plot_corrplotgg(), plot_discrete_barplot(), plot_heatmap(), plot_het_barplot(), plot_indiv_boxplot(), plot_indiv_corrscatt(), plot_indiv_paired(), plot_overview_corr_scatt(), plot_profile_barplot(), run_corrplot_analysis()

kazeera/hourglass documentation built on April 5, 2025, 7:18 a.m.