run_profile_barplot: Generates both fill and stacked bar plots and saves to file

In kazeera/hourglass: This Package Provides Visualizations of Annotated Numeric Data

Generates both fill and stacked bar plots and saves to file

Description

Generates both fill and stacked bar plots and saves to file

Usage

run_profile_barplot(
  df,
  rowAnn_col = 1,
  out_dir = ".",
  labels = "",
  log_ = F,
  gradient_palette = "RdBu"
)

Arguments

df	A data frame - first column: rowAnnotation column with groups, the rest of the columns are values.
rowAnn_col	A column index (numeric) or name in df indicating which groups to stratify by.
out_dir	The output directory where the plot will be saved, default is current working directory.
labels	A character vector of at least length 1 that will be collapsed for file name/plot titles.
log_	Logical indicating whether to log2-transform values
gradient_palette	RColorBrewer palette for variable colors if var_colors is NA. See RColorBrewer::display.brewer.all() for all options.

kazeera/hourglass documentation built on April 5, 2025, 7:18 a.m.