run_surv_analysis: Iteratively plot survival curves (Kaplan Meier)

In kazeera/hourglass: This Package Provides Visualizations of Annotated Numeric Data

Iteratively plot survival curves (Kaplan Meier)

Description

Iteratively plot survival curves (Kaplan Meier)

Usage

run_surv_analysis(ds, rowAnn1, run, surv_folder = ".", var_colors = NULL)

Arguments

ds	A dataset object (a list with vals, rowAnn, colAnn, comparison, name).
rowAnn1	A string description/label for file names and plot title; could be strata name
run	A one row data frame or list object with logicals for what to run, names: surv_time_column, surv_status_column
var_colors	List of colors, where elements are hex codes and element names are rowAnn variables. e.g. list("Tumour"="#2f4f4Fff", "Stroma"="#d2691eff") See ?get_colors for more info.
output_folder	The main output folder for all custom analysis plots and boxplots for by.parameter and by.feature analysis

kazeera/hourglass documentation built on April 5, 2025, 7:18 a.m.