subset_feat_sets_ds: Subset dataset for custom analysis

In kazeera/hourglass: This Package Provides Visualizations of Annotated Numeric Data

Subset dataset for custom analysis

Description

Get a subset of dataset list object from custom analysis table

Usage

subset_feat_sets_ds(
  ds,
  feat_sets,
  i,
  colAnns,
  std.or.alt = "Standard",
  feat_sets_order = T
)

Arguments

ds	A dataset object (a list with vals, rowAnn, colAnn, comparison, name).
feat_sets	A list of 2 data frames for feature sets and parameters.
i	Row number in feat_sets$sets.
colAnns	A character vector of 1-2 column names in ds$colAnn. c(Parameter, Feature/Stain/Gene)
std.or.alt	string, specifies to use either "Standard" or "Alternative" parameters.
feat_sets_order	Logical, should we preserve feat_sets order?

Value

A list object specifying: ds, colAnns, feat_sets_name (name of custom analysis)

kazeera/hourglass documentation built on April 5, 2025, 7:18 a.m.