DHpop_map: Name of the file containing genotypic (marker scores)...
In kbroman/lmem.qtler: Linear Mixed Effects Models for QTL Mapping for Multienvironment and Multitrait Analysis
Description
For this example, a doubled haploid population of 200 individuals was
developed by crossing a short line (parent A), with a tall line (parent B).
The 200 doubled haploid lines were evaluated in a field trial and the plant
height measured in cm (the data is in the file DHpop_pheno.txt).
The population was also genotyped by SNPs, and the data is presented in the
file DHpop_geno.txt.
The map location of each of the markers is in the file DHpop_map.txt.
Usage
1
Format
A data frame 130 row (markers) and 3 column.Column 1 gives the marker names,
column 2 the chromosome on which the marker has been mapped, and column 3 indicates
the position of the marker within the chromosome.
kbroman/lmem.qtler documentation built on May 30, 2019, 3:10 p.m.
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Description
For this example, a doubled haploid population of 200 individuals was developed by crossing a short line (parent A), with a tall line (parent B). The 200 doubled haploid lines were evaluated in a field trial and the plant height measured in cm (the data is in the file DHpop_pheno.txt). The population was also genotyped by SNPs, and the data is presented in the file DHpop_geno.txt. The map location of each of the markers is in the file DHpop_map.txt.
Usage
1 |
Format
A data frame 130 row (markers) and 3 column.Column 1 gives the marker names, column 2 the chromosome on which the marker has been mapped, and column 3 indicates the position of the marker within the chromosome.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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