R/recla-data.R

## recla-data.R

#' @name recla
#' @title Example kinship, phenotype, and covariate data
#'
#' @description Estimated kinship matrix, phenotypes, and covariates
#' for diversity outcross mice, taken from Recla et al. (2014) and
#' Logan et al. (2013)
#'
#' @details These are data for a set of diversity outcross mice. The
#' kinship matrix was calculated from MUGA array data, using the
#' [R/qtl2](https://kbroman.org/qtl2) package.
#'
#' @format A list with three components, `kinship`, `pheno`,
#' and `covar`, each a matrix.
#'
#' @references Recla JM, Robledo RF, Gatti DM, Bult CJ, Churchill GA,
#' Chesler EJ (2014) Precise genetic mapping and integrative
#' bioinformatics in Diversity Outbred mice reveals Hydin as a novel
#' pain gene. Mamm Genome 25:211-222
#'
#' Logan RW, Robledo RF, Recla JM, Philip VM, Bubier JA, Jay JJ,
#' Harwood C, Wilcox T, Gatti DM, Bult CJ, Churchill GA, Chesler EJ
#' (2013) High-precision genetic mapping of behavioral traits in the
#' diversity outbred mouse population. Genes Brain Behav 12:424-437
#'
#' @source QTL Archive, <https://phenome.jax.org/projects/Recla1>
#' @keywords datasets
#' @examples
#' data(recla)
#'
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