predict,ubmsFit-method | R Documentation |
This method generates predicted parameter values for the original dataset or a new dataset using the posterior distribution. Standard deviation and a customizable uncertainty interval are also calculated.
## S4 method for signature 'ubmsFit'
predict(
object,
submodel,
newdata = NULL,
transform = TRUE,
re.form = NULL,
level = 0.95,
...
)
object |
A fitted model of class |
submodel |
Submodel to predict from, for example |
newdata |
Optional data frame, SpatRaster, or RasterStack of covariates to generate predictions from. If not provided (the default), predictions are generated from the original data |
transform |
If |
re.form |
If |
level |
Probability mass to include in the uncertainty interval |
... |
Currently ignored |
If newdata
was a data frame: A data frame with one row per
prediction and four columns:
1) Predicted point estimates (posterior means),
2) Standard deviation of the posterior,
3-4) Lower and upper bounds of the specified uncertainty interval
For parameters with more than one dimension, the rows are in site-major order, or site-year-observation for dynamic models.
If newdata
was a SpatRaster/RasterStack, returns a SpatRaster/RasterStack
with four layers corresponding to the four columns above with the same projection
as the original SpatRaster/RasterStack.
posterior_linpred, posterior_interval
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