Files in kevinrue/Hancock
Learn and Apply Cell Type Signatures
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
.travis.yml
CONTRIBUTING.md
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/AllGenerics.R
R/GSEABase-helpers.R
R/constants.R
R/hancock-package.R
R/learn-methods.R
R/markerDetection-methods.R
R/plot-methods.R
R/predict-methods.R
R/shinyLabels.R
R/unisets-helpers.R
README.md
_pkgdown.yml
codecov.yml
inst/extdata/export.gmt
inst/extdata/intro_shinyLabels.txt
inst/extdata/pbmc3k.ident.rds
inst/extdata/seurat_pbmc3k.gmt
inst/ignore/gender.Rmd
inst/ignore/gender1.Rmd
inst/ignore/gender_TCGA.Rmd
inst/www/hancock_hexsticker.ai
inst/www/hancock_hexsticker.png
inst/www/hancock_hexsticker.svg
man/figures/logo.png
man/hancock-package.Rd
man/learnMarkersByPositiveProportionDifference.Rd
man/learnSignatures.Rd
man/makeDetectionMatrices.Rd
man/makeFilterExpression.Rd
man/predictByProportionPositive.Rd
man/predictSignatures.Rd
man/shinyLabels.Rd
man/uniqueMarkerNames.Rd
src/hancock.h
src/init.cpp
src/num_detected_markers.cpp
src/utils.cpp
src/utils.h
tests/testthat.R
tests/testthat/setup-library.R
tests/testthat/test-GeneSetCollection.R
tests/testthat/test-learnSignatures.R
tests/testthat/test-markerDetection.R
tests/testthat/test-predict.R
vignettes/concepts.Rmd
vignettes/hancock.Rmd
vignettes/hancock.bib
