Man pages for kgori/svfiltr
Filter BRASS Structural Variants

all_greater_thanFind rows of a dataframe where all of the values are above a...
all_less_thanFind rows of a dataframe where all of the values are below a...
any_greater_thanFind rows of a dataframe where any of the values is above a...
any_less_thanFind rows of a dataframe where any of the values is below a...
apply_boundariesFilter data frame so all samples selected by 'index' have...
binary_phylipConvert data to binary
breakpoint_spanCalculate distance between left and right breakpoint
estimate_boundariesAttempt to find the boundary between noisy, low-coverage SVs...
load_filteredLoad a filtered data frame
load_hydraReturns a dataframe from a hydra-multi run
one_greater_thanFind rows of a dataframe where exactly one of the values is...
one_less_thanFind rows of a dataframe where exactly one of the values is...
variant_distanceRetain SVs that span a distance greater than threshold
write_phylipWrite data as binary sequence alignment in Phylip format
kgori/svfiltr documentation built on May 18, 2017, 7:41 p.m.