getTraits: Getting Traits Associated with Crops from the ICARDA's...

In khadijaaziz/icardaFIGSr: Subsetting using Focused Identification of the Germplasm Strategy (FIGS)

Description

Return a data frame containing traits associated with a particular crop, their description and related identifiers.

Usage

getTraits(crop)

Arguments

crop	character. Crop for which to get available traits.

Details

getTraits returns a data frame of traits together with their IDs and coding system used for each trait.

Possible inputs for crop include:

• 'Aegilops'

• 'Barley'

• 'Bread wheat'

• 'Chickpea'

• 'Durum wheat'

• 'Faba bean'

• 'Faba bean BPL'

• 'Forage and range'

• 'Lathyrus'

• 'Lentil'

• 'Medicago annual'

• 'Not mandate cereals'

• 'Pisum'

• 'Primitive wheat'

• 'Trifolium'

• 'Vicia'

• 'Wheat hybrids'

• 'Wheat wild relatives'

• 'Wild Cicer'

• 'Wild Hordeum'

• 'Wild Lens'

• 'Wild Triticum'

A list of available crops to use as input for crop can also be obtained from ICARDA's online server using getCrops.

Value

A data frame with traits that are associated with the crop specified in crop.

Author(s)

Khadija Aouzal, Amal Ibnelhobyb, Zakaria Kehel, Fawzy Nawar

Examples

## Not run: 
if(interactive()){
 # Get traits for bread wheat
 breadTraits <- getTraits(crop = 'Bread wheat')
 }

## End(Not run)

khadijaaziz/icardaFIGSr documentation built on Dec. 21, 2021, 6:38 a.m.