findDropouts: Establishes which zero values in 'x' are dropout events based...

In khazum/ccImpute: ccImpute: an accurate and scalable consensus clustering based approach to impute dropout events in the single-cell RNA-seq data (https://doi.org/10.1186/s12859-022-04814-8)

Establishes which zero values in x are dropout events based on weighted cell voting with weights derived from processed consensus matrix consMtx.

Description

Establishes which zero values in x are dropout events based on weighted cell voting with weights derived from processed consensus matrix consMtx.

Usage

findDropouts(x, consMtx)

Arguments

x	transpose of log normalized expression matrix
consMtx	processed consensus matrix

Value

list of indices in x that are dropout events

khazum/ccImpute documentation built on Nov. 28, 2022, 7:27 a.m.