db_describe_sample: Add details about a new sample

In khondula/rodm2: Use an ODM2 Database in R

Description

Add details about a new sample

Usage

db_describe_sample(db, sample_code, site_code)

Arguments

db	database connection
sample_code	sampling feature code for sample
site_code	sampling feature code for where sample was collected from

Details

Adds entry to samplingfeatures table as type 'Specimen' and entry into related features table that "sample_code" wasCollectedAt "site_code". Does not add an action for specimen collection - for that use db_insert_results_samples.

Value

message that sample was added to sampling feature table

Examples

db <- create_sqlite(connect = TRUE)
db_describe_site(db, site_code = "site1")

db_describe_sample(db,
sample_code = "sample001",
site_code = "site1")

khondula/rodm2 documentation built on Jan. 9, 2020, 1:48 p.m.