plotexprs: Plot fitted expression, switch times, and peak times
In kieranrcampbell/bnlfa: Interpretable marker-based single-cell pseudotime using Bayesian parametric models
Description
Usage
Arguments
Value
Examples
Description
Plot the expression along pseudotime with the maximum a posteriori (MAP)
mean function as fitted by Ouija, or the MAP estimates of the
switch and peak times along with 95
Usage
1
2
3
4
5
plot_switch_times(oui)
plot_peak_times(oui)
plot_expression(oui, ncol = 2, nrow = NULL)
Arguments
oui
A ouija_fit to plot
ncol
The number of columns for the expression plot
nrow
The number of rows for the expression plot
Value
A ggplot2 object plotting the expression, switch times, or peak times
Examples
1
2
3
4
5
6
7
data(oui)
plot_expression(oui)
plot_switch_times(oui)
## Not run:
plot_peak_times(oui)
## End(Not run)
kieranrcampbell/bnlfa documentation built on Dec. 2, 2019, 12:44 p.m.
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Description Usage Arguments Value Examples
Description
Plot the expression along pseudotime with the maximum a posteriori (MAP) mean function as fitted by Ouija, or the MAP estimates of the switch and peak times along with 95
Usage
1 2 3 4 5 | plot_switch_times(oui)
plot_peak_times(oui)
plot_expression(oui, ncol = 2, nrow = NULL)
|
Arguments
oui |
A |
ncol |
The number of columns for the expression plot |
nrow |
The number of rows for the expression plot |
Value
A ggplot2 object plotting the expression, switch times, or peak times
Examples
1 2 3 4 5 6 7 | data(oui)
plot_expression(oui)
plot_switch_times(oui)
## Not run:
plot_peak_times(oui)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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