Man pages for kieranrcampbell/pseudogp
Probabilistic pseudotime for single-cell RNA-seq

fitPseudotimeFit probabilistic pseudotime model
le_fitStan fit for laplacian eigenmaps representation of monocle
monocle_leLaplacian eigenmaps representation of monocle data
monocle_pcaPCA representation of monocle data
monocle_tsnet-SNE representation of monocle data
plotDiagnosticPlot MCMC diagnostics.
posteriorBoxplotPosterior boxplot ordered by pseudotime
posteriorCurvePlotPosterior curve plot.
posterior_mean_curveCompute the posterior mean curve
standardizeColumn-wise standardize input data to mean 0 and variance 1
kieranrcampbell/pseudogp documentation built on Oct. 6, 2017, 11:15 p.m.