Man pages for kieranrcampbell/switchde
Switch-like differential expression across single-cell trajectories
| example_sigmoid | Example sigmoid plot |
| ex_pseudotime | Synthetic gene pseudotimes |
| extract_pars | Extract parameters from fitted model |
| fit_nzi_model | Fit a (non-zero-inflated) model for a single gene |
| fit_zi_model | Fit a zero-inflated model for a single gene |
| sanitise_inputs | Sanitise inputs |
| sigmoid | Calculate the mean vector given parameters and pseudotimes... |
| switchde | Switch-like model fitting and differential expression test |
| switchplot | Plot gene behaviour |
| synth_gex | Synthetic gene expression matrix |
