lavine2013: POMP model for pertussis in Copenhagen
In kingaa/pompExamples: Additional POMP Examples
Description
Author(s)
References
See Also
Examples
Description
A pomp object encoding the model and data from the Lavine et al. (2013) paper on pertussis in Copenhagen.
The data consist of weekly pertussis case reports from 1900 through 1937.
The model is the “SIRW” model described in the paper.
The pomp object includes parameters at the maximum likelihood point estimate.
Author(s)
Aaron A. King kingaa at umich dot edu
References
J.S. Lavine, A.A. King, V. Andreasen, and O.N. Bj\ornstad,
Immune Boosting Explains Regime-Shifts in Prevaccine-Era Pertussis Dynamics,
PLoS ONE, 8:e72086, 2013.
DOI: 10.1371/journal.pone.0072086
See Also
pomp-class
Examples
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library(ggplot2)
library(reshape2)
library(magrittr)
pompExample(lavine2013)
plot(lavine2013)
plot(simulate(lavine2013))
kingaa/pompExamples documentation built on May 20, 2019, 10:01 a.m.
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Description Author(s) References See Also Examples
Description
A pomp object encoding the model and data from the Lavine et al. (2013) paper on pertussis in Copenhagen.
The data consist of weekly pertussis case reports from 1900 through 1937.
The model is the “SIRW” model described in the paper.
The pomp object includes parameters at the maximum likelihood point estimate.
Author(s)
Aaron A. King kingaa at umich dot edu
References
J.S. Lavine, A.A. King, V. Andreasen, and O.N. Bj\ornstad, Immune Boosting Explains Regime-Shifts in Prevaccine-Era Pertussis Dynamics, PLoS ONE, 8:e72086, 2013. DOI: 10.1371/journal.pone.0072086
See Also
pomp-class
Examples
1 2 3 4 5 6 7 8 | library(ggplot2)
library(reshape2)
library(magrittr)
pompExample(lavine2013)
plot(lavine2013)
plot(simulate(lavine2013))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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