Coordinate_Covnerter5_1: Coordinate Converter 5_1

In kingyang728/genomicCoordinateConverter: Coordinate Converter

Description

This function take transcript id and transcript location as input and convert these to a dataframe which contains corresponding genomic position, codon and codon's number.

Usage

Coordinate_Covnerter5_1(transcript_id, TX_start, TX_end)

Arguments

transcript_id	transcript passed in should be external transcript name like "HDAC6-201"
TX_start	transcript start position like 2657
TX_end	transcript end position like 2657

Value

dataframe which contians corresponding genomic position, codon and codon's number.

Examples

DF5_1<-Coordinate_Covnerter5_1("HDAC6-201",2657,2657)

kingyang728/genomicCoordinateConverter documentation built on June 29, 2020, 4:05 a.m.