Files in kinsigne/atSNP_modified
Affinity test for identifying regulatory SNPs.
.gitignore
DESCRIPTION
NAMESPACE
R/data.R
R/graphic.R
R/motif_analysis.R
R/utility.R
README.md
Read-and-delete-me
data/default_par.rda
data/encode_library.rda
data/encode_motif.rda
data/example.rda
data/jaspar_library.rda
man/ComputeMotifScore.Rd
man/ComputePValues.Rd
man/GetIUPACSequence.Rd
man/LoadFastaData.Rd
man/LoadMotifLibrary.Rd
man/LoadSNPData.Rd
man/MatchSubsequence.Rd
man/dtMotifMatch.Rd
man/encode_motif.Rd
man/encode_motifinfo.Rd
man/jaspar_motif.Rd
man/jaspar_motifinfo.Rd
man/motif_encode.Rd
man/motif_info.Rd
man/motif_library.Rd
man/motif_scores.Rd
man/plotMotifMatch.Rd
man/prior.Rd
man/snpInfo.Rd
man/snp_tbl.Rd
man/transition.Rd
src/ImportanceSample.cpp
src/ImportanceSampleChange.cpp
src/ImportanceSampleDiff.cpp
src/MotifScore.cpp
src/MotifScore.h
src/symbols.rds
tests/.Rhistory
tests/test.R
tests/test_change.R
tests/test_diff.R
tests/test_is.R
vignettes/atsnp.R
vignettes/atsnp.pdf
vignettes/atsnp.rnw
vignettes/atsnp.tex
vignettes/capturefile42ac5229e1c.ps
vignettes/document.bib
vignettes/natbib.sty
