GetIUPACSequence: Get the IUPAC sequence of a motif.

Description Usage Arguments Value Author(s) Examples

View source: R/motif_analysis.R

Description

Convert the posotion weight matrix of a motif to the IUPAC sequence.

Usage

1
GetIUPACSequence(pwm, prob = 0.25)

Arguments

pwm

The position weight matrix, with the columns representing A, C, G, T.

prob

The probability threshold. Default: 0.25.

Value

A character string.

Author(s)

Chandler Zuo[email protected]

Examples

1
2

kinsigne/atSNP_modified documentation built on May 23, 2019, 4:24 p.m.