logpost: logpost computes the log posterior of the CDSeq model....
In kkang7/CDSeq_R_Package: A Complete Deconvolution Method using Sequencing Data
Description
Usage
Arguments
Value
Description
logpost computes the log posterior of the CDSeq model.
logpost outputs the value of log posterior.
Usage
1
Arguments
estProp
CDSeq-estimated cell type proportions.
estGEP
CDSeq-estimated cell-type-specific GEPs.
mydata
input bulk RNA-seq data.
alpha
hyperparameter for cell type proportion estimation.
beta
hyperparameter for cell-type-specific GEP estimation.
Value
logpost returns log posterior values.
kkang7/CDSeq_R_Package documentation built on May 4, 2021, 8:12 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
logpost computes the log posterior of the CDSeq model.
logpost outputs the value of log posterior.
Usage
1 |
Arguments
estProp |
CDSeq-estimated cell type proportions. |
estGEP |
CDSeq-estimated cell-type-specific GEPs. |
mydata |
input bulk RNA-seq data. |
alpha |
hyperparameter for cell type proportion estimation. |
beta |
hyperparameter for cell-type-specific GEP estimation. |
Value
logpost returns log posterior values.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.