kkdey/CountClust: Clustering and Visualizing RNA-Seq Expression Data using Grade of Membership Models
Version 0.1.2

Fits grade of membership models (GoM, also known as admixture models) to cluster RNA-seq gene expression count data, identifies characteristic genes driving cluster memberships, and provides a visual summary of the cluster memberships.

Getting started

Package details

Bioconductor views Clustering GeneExpression RNASeq Sequencing Software StatisticalMethod Visualization
MaintainerKushal Dey <kkdey@uchicago.edu>
LicenseGPL (>= 2)
Version0.1.2
URL https://github.com/kkdey/CountClust
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("kkdey/CountClust")
kkdey/CountClust documentation built on July 29, 2017, 2:52 p.m.