kkdey/CountClust: Clustering and Visualizing RNA-Seq Expression Data using Grade of Membership Models
Fits grade of membership models (GoM, also known as admixture models) to cluster RNA-seq gene expression count data, identifies characteristic genes driving cluster memberships, and provides a visual summary of the cluster memberships.
Getting started
Browse package contents
Package details |
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|---|---|
| Bioconductor views | Clustering GeneExpression RNASeq Sequencing Software StatisticalMethod Visualization |
| Maintainer | Kushal Dey <kkdey@uchicago.edu> |
| License | GPL (>= 2) |
| Version | 1.6.3 |
| URL | https://github.com/kkdey/CountClust |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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