Files in kkdey/CountClust
Clustering and Visualizing RNA-Seq Expression Data using Grade of Membership Models

.DS_Store
.Rbuildignore
.gitignore
.travis.yml
CountClust.Rproj
DESCRIPTION
NAMESPACE
NEWS
R/BatchCorrectedCounts.R R/ExtractHighCorFeatures.R R/ExtractTopFeatures.R R/FitGoM.R R/FitGoMpool.R R/RemoveSparseFeatures.R R/StructureGGplot.R R/Structure_omega.R R/cg_topics.R R/compGoM.R R/compare_omega.R R/data.R R/handleNA.R R/nullmodel_GoM.R README.md
data/.DS_Store
data/AbundanceGoM.rda
data/GTExV6Brain.FitGoM.rda
data/MouseDeng2014.FitGoM.rda
data/MouseJaitinSpleen.FitGoM.rda
data/datalist
data/ex.counts.rda
man/AbundanceGoM.Rd man/BatchCorrectedCounts.Rd man/ExtractHighCorFeatures.Rd man/ExtractTopFeatures.Rd man/FitGoM.Rd man/FitGoMpool.Rd man/GTExV6Brain.FitGoM.Rd man/MouseDeng2014.FitGoM.Rd man/MouseJaitinSpleen.FitGoM.Rd man/RemoveSparseFeatures.Rd man/StructureGGplot.Rd man/Structure_omega.Rd man/cg_topics.Rd man/compGoM.Rd man/compare_omega.Rd man/ex.counts.Rd man/handleNA.Rd man/nullmodel_GoM.Rd
vignettes/.DS_Store
vignettes/count-clust.R
vignettes/count-clust.Rnw
vignettes/count-clust.aux
vignettes/count-clust.log
vignettes/count-clust.out
vignettes/count-clust.pdf
vignettes/count-clust.synctex.gz
vignettes/count-clust.tex
vignettes/count-clust.toc
vignettes/figure/plot_topic-1.png
vignettes/figure/plot_topic_deng-1.png
vignettes/figure/plot_topic_gtex-1.png
vignettes/figures/gtex_annot-1.png
vignettes/figures/plot_topic-1.png
vignettes/figures/plot_topic_2-1.png
vignettes/figures/plot_topic_deng-1.png
vignettes/figures/plot_topic_gtex-1.png
vignettes/structure_plot.png
kkdey/CountClust documentation built on July 29, 2017, 2:52 p.m.