matchData: Helper function for runGenotypeComparison.

In kkolmus/MolecularAnalyzeR: This package aims at checking correlation between gene expression and copy number variation for cohorts of patients analyzed within The Cancer Genome Atlas project

Description

Helper function for runGenotypeComparison.

Usage

matchData(data, genotype.Class = c("Loss", "Gain", "WT"), gene2)

Arguments

data	output of the prepareData function
genotype.Class	genotype class of gene 1, possible arguments: WT, Gain, Loss, character string
gene2	gene for which normalized expression data were extracted, character string

Value

numeric vector of expression data for a given genotype

Examples

## Not run: genotype.Class(data, genotype.Class = "WT", gene2 = "CFLAR")

kkolmus/MolecularAnalyzeR documentation built on Dec. 21, 2021, 6:46 a.m.