make.seurat.object: Generates a seurat object of 10x raw data
In klprint/customSC: Custom functions for single cell transcriptomics analysis
Description
Usage
Arguments
Value
Description
Using the 10x output path with the genes, barcodes and matrix files.
Usage
1
2
make.seurat.object(path, cell.name.addition = NULL, min.genes = 100,
project = "SeuratProject")
Arguments
path
Path to the 10x output
cell.name.addition
Prefix for each cell barcode
min.genes
Minimal number of genes which need to be detected per barcode to keep the barcode
Value
Seurat object
klprint/customSC documentation built on May 28, 2019, 5:54 p.m.
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Description Usage Arguments Value
Description
Using the 10x output path with the genes, barcodes and matrix files.
Usage
1 2 | make.seurat.object(path, cell.name.addition = NULL, min.genes = 100,
project = "SeuratProject")
|
Arguments
path |
Path to the 10x output |
cell.name.addition |
Prefix for each cell barcode |
min.genes |
Minimal number of genes which need to be detected per barcode to keep the barcode |
Value
Seurat object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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