LnbDict-class: Lnbdict

In kojikoji/nbcf: Change point detection for time course multi negative binomial observation

Description

Data stroge for log negative binomial probability

Details

This class is a storage for precomputated log negative binomial probability. This also has the index conversion matrix and vector for parameter p and count.

Slots

values

Numeric Matrix, This storage log negative binomial probability. Each column and row represent each grid of count and p.

lprior.values

Numeric vector, log prior probability values for each gridpoints

count.dict

This is a sparse vector each elements have the row index of value cressponding the count represented by index of this vector

p.dict

This is a dense matrix. Each element has a column index of value after correction against mean.bias.vec. Each row represents index of p before correction. Each column represents observation index.

p.width.vec

grid width of p

Author(s)

Yasuhiro Kojima

kojikoji/nbcf documentation built on June 16, 2019, 6:08 p.m.