BrickContainer_list_output_directory: Return the output directory of the BrickContainer

In koustav-pal/HiCLegos: Framework for Storing and Accessing Hi-C Data Through HDF Files

Return the output directory of the BrickContainer

Description

BrickContainer_list_output_directory returns the location of the associated HDF files

Usage

BrickContainer_list_output_directory(Brick = NULL)

Arguments

Brick

Required. A string specifying the path to the Brick store created with Create_many_Bricks.

Value

A character string specifying the descriptive name of the BrickContainer

Examples

Bintable.path <- system.file("extdata",
"Bintable_100kb.bins", package = "HiCBricks")

out_dir <- file.path(tempdir(), "BrickContainer_list_out_dir_test")
dir.create(out_dir)

My_BrickContainer <- Create_many_Bricks(BinTable = Bintable.path, 
    bin_delim = " ", output_directory = out_dir, file_prefix = "Test", 
    experiment_name = "Vignette Test", resolution = 100000, 
    remove_existing = TRUE)

BrickContainer_list_output_directory(My_BrickContainer)

koustav-pal/HiCLegos documentation built on Nov. 5, 2022, 5:49 p.m.